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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs657715 chr3:124363022 C/A 4.83E-5 497 37.18 40.05 18.7 KM Plot
KIRC rs6578415 chr11:1500000 G/C 8.43E-5 507 5.47 37.53 37.33 KM Plot
KIRC rs6578439 chr11:1520995 A/G 8.08E-5 509 5.47 37.2 37.47 KM Plot
KIRC rs6578441 chr11:1525573 A/G 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs6578452 chr11:1529625 C/T 0.000104 496 5.47 41.27 37.4 KM Plot
KIRC rs6578453 chr11:1529640 C/A 0.000104 496 5.47 41.27 37.4 KM Plot
KIRC rs659092 chr11:117917962 A/G 0.000103 509 37.77 30.37 25.6 KM Plot
KIRC rs66501527 chr1:233536678 C/CAA 2.58E-6 502 37.47 37.6 3.67 KM Plot
KIRC rs66790453 chr6:26107088 C/T 2.14E-8 493 37.67 36.95 3.37 KM Plot
KIRC rs66883962 chr19:43817423 A/G 7.3E-12 499 37.67 37.47 2.17 KM Plot
KIRC rs66983783 chr6:25821992 TATACA/T 0.00013 507 37.77 29.9 4.1 KM Plot
KIRC rs670994 chr3:124362323 A/G 4.83E-5 497 37.18 40.05 18.7 KM Plot
KIRC rs672282 chr4:12931901 A/G 3.67E-5 504 37.18 37.67 3.53 KM Plot
KIRC rs672763 chr3:124363006 T/A 4.83E-5 497 37.18 40.05 18.7 KM Plot
KIRC rs67296946 chr6:26048559 T/G 1.1E-8 506 37.7 33.93 3.37 KM Plot